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DAx Data Acquisition and Data Analysis

Some publications using DAx


DNA analyses

Chisa, JL and Burke, DT. Mammalian mRNA splice-isoform selection is tightly controlled. Genetics 175:1079-11087 (2007).

Karolina Pajerowska-Mukhtar, Benjamin Stich, Ute C. Achenbach, Agim Ballvora,** Jens Lbeck, Josef Strahwald, Eckhard Tacke, Hans-Reinhard Hofferbert, Evgeniya Ilarionova, Diana Bellin, Birgit Walkemeier, Rico Basekow, Birgit Kersten, and Christiane Gebhardt. 2009. *Single Nucleotide Polymorphisms in the /Allene Oxide Synthase 2/ Gene are Associated with Field Resistance to Late Blight in Populations of Tetraploid Potato Cultivars* Genetics, Jan 2009; doi:10.1534/genetics.108.094268

Sattarzadeh A, Achenbach U, Lbeck J, Strahwald J, Tacke E, Hofferbert HR, Rothsteyn T, Gebhardt C. 2006 Single nucleotide polymorphism (SNP) genotyping as basis for developing a PCR-based marker highly diagnostic for potato varieties with high resistance to /Globodera pallida/ pathotype Pa2/3. Mol Breed 18:301-312

Using SNP markers to dissect linkage disequilibrium at a major quantitative trait locus for resistance to the potato cyst nematode /Globodera pallida/ on potato chromosome V
Ute Achenbach, Joao Paulo, Evgenyia Ilarionova, Jens Lbeck, Josef Strahwald, Eckhard Tacke, Hans-Reinhard Hofferbert, and Christiane Gebhardt. 2009. TAG vol 3:619-629

Pratt BF, O'connor DH, Lafont BA, Mankowski JL, Fernandez CS, Triastuti R, Brooks AG, Kent SJ, Smith MZ. 2006. MHC class I allele frequencies in pigtail macaques of diverse origin.
Immunogenetics. 2006 Nov 10; [Epub ahead of print]; PMID: 17096100 [PubMed - as supplied by publisher]

Wojcechowskyj JA, Yant LJ, Wiseman RW, O'connor SL, O'connor DH. 2006. Control of SIVmac239 is not predicted by inheritance of Mamu-B*17- containing haplotypes.
J Virol. 2006 Nov 1; [Epub ahead of print]; PMID: 17079280 [PubMed - as supplied by publisher]

Wiseman RW, Wojcechowskyj JA, Greene JM, Blasky AJ, Gopon T, Soma T, Friedrich TC, O'connor SL, O'connor DH. 2006. SIVmac239 Infection of MHC Identical Cynomolgus Macaques from Mauritius.
J Virol. 2006 Oct 11; [Epub ahead of print]; PMID: 17035320 [PubMed - as supplied by publisher]

Meredith A. J. Hullar, Louis A. Kaplan, and David A. Stahl *. 2006. Recurring Seasonal Dynamics of Microbial Communities in Stream Habitats Applied and Environmental Microbiology, Jan. 2006, p. 713722 Vol. 72, No. 1.

Anne E. Bernhard, Thomas Donn, Anne E. Giblin and David A. Stahl *. 2005. Loss of diversity of ammonia-oxidizing bacteria correlates with increasing salinity in an estuary system. Environmental Microbiology, Volume 7 Page 1289 - September 2005

Krebs, K. C., Z. Jin, R. Rudersdorf, A. L. Hughes, and D. H. O'connor. 2005. Unusually high frequency MHC class I alleles in mauritian origin cynomolgus macaques. J Immunol 175:5230.

Smith, M. Z., C. S. Fernandez, A. Chung, C. J. Dale, R. De Rose, J. Lin, A. G. Brooks, K. C. Krebs, D. I. Watkins, D. H. O'Connor, M. P. Davenport, and S. J. Kent. 2005. The pigtail macaque MHC class I allele Mane-A*10 presents an immundominant SIV Gag epitope: identification, tetramer development and implications of immune escape and reversion. J Med Primatol 34:282.

Van Mooy, B.A.S., Devol, A.H. and Keil, R.G. 2004. Relationships between bacterial community structure, light and carbon cycling in the easter subarctic North Pacific. Limnol. Oceanogr. 49:1056-1062.

Ann Wainright *, Uyen T. Nguyen, TorLeif Bjornson, Travis D. Boone. 2000. Preconcentration and separation of double-stranded DNA fragments by electrophoresis in plastic microfluidic devices. Electrophoresis, Volume 24, Issue 21, Pages 3784 - 3792.

Marie-Laure Lesaicherre, Sam F. Y. Li *, Hian K. Lee. 2000. Separation of polymerase chain reaction amplified bird genes by capillary electrophoresis. Electrophoresis, Volume 21, Issue 7, Pages 1336 - 1340.

Other analyses

William W. P. Chang *, Christine Hobson, David C. Bomberger, Luke V. Schneider. 2005. Rapid separation of protein isoforms by capillary zone electrophoresis with new dynamic coatings. Electrophoresis, Volume 26, Issue 11 , Pages 2179 - 2186.

Yen-Ling Chen and Shou-Mei Wu. 2005. Capillary zone electrophoresis for simultaneous determination of seven nonsteroidal anti-inflammatory drugs in pharmaceuticals. Analytical and Bioanalytical Chemistry, Issue: Volume 381, Number 4, Pages 907 - 912, February 2005

Ridvan Say, Arzu Ersz, Izzet Sener, Aya Atilir, Sibel Diltemiz, Adil Denizli. 2004. Comparison of Adsorption and Selectivity Characteristics for 4-Nitrophenol Imprinted Polymers Prepared via Bulk and Suspension Polymerization. Separation Science and Technology, Volume 39, Number 15 / 2004, Pages 3471 - 3484

Lei Guo, Frank-Michael Matysik and Petra Glser. 2004. Speciation of organotin compounds by capillary electrophoresis: comparison of aqueous and mixed organic-aqueous systems. Analytical and Bioanalytical Chemistry, Volume 380, Number 4, October 2004, Pages 669 - 676.

Acharya B. Vishu Kumar, Lalitha R. Gowda and Rudrapatnam N. Tharanathan. 2004. Non-specific depolymerization of chitosan by pronase and characterization of the resultant products. European Journal of Biochemistry, Volume 271 Page 713 - February 2004.

Martin G. Schmid *, Julia Koidl, Christina Freigassner, Sandra Tahedl, Lena Wojcik, Thomas Beesley, Daniel W. Armstrong, Gerald Gbitz. 2004. New particle-loaded monoliths for chiral capillary electrochromatographic separation. Electrophoresis, Volume 25, Issue 18-19 , Pages 3195 - 3203.

Nina Grobuschek, Lawan Sriphong, Martin G. Schmid, Tamas Lorand, Hassan Y. Aboul-Enein, Gerald Gubitz *. 2002. Chiral separation of bioactive cyclic Mannich ketones by HPLC and CE using cellulose derivatives and cyclodextrins as chiral selectors. J. Biochem. Biophys. Methods 53 (2002) 2536.

Dmitri Y. Boudko,* Leonid L. Moroz, William R. Harvey, and Paul J. Linser. 2001. Alkalinization by chloride/bicarbonate pathway in larval mosquito midgut. Proc Natl Acad Sci U S A, 2001, December 18; 98(26): 1535415359.

M. E. Palmer, R. F. Smith *, K. Chambers, L. W. Tetler. 2001. Separation of nicotine metabolites by capillary zone electrophoresis and capillary zone electrophoresis/mass spectrometry. Rapid Communications in Mass Spectrometry, Volume 15, Issue 3 , Pages 224 - 231.

Marie-Laure Lesaicherre, Sam F. Y. Li *, Hian K. Lee. 2000. Separation of polymerase chain reaction amplified bird genes by capillary electrophoresis. Electrophoresis, Volume 21, Issue 7 , Pages 1336 - 1340.

K. Ingkaninan, A. Hazekamp, C. M. de Best, H. Irth, U. R. Tjaden, R. van der Heijden, J. van der Greef, and R. Verpoorte*. 2000. The Application of HPLC with On-Line Coupled UV/MS-Biochemical Detection for Isolation of an Acetylcholinesterase Inhibitor from Narcissus 'Sir Winston Churchill'. J. Nat. Prod., 63 (6), 803 -806, 2000.

Pastene, E. R., Bocaz, G., Peric, I. et al. 2000. Separation by capillary electrophoresis of c-glycosylflavonoids in passiflora sp. extracts. Bol. Soc. Chil. Qum.. [online]. set. 2000, vol.45, no.3 [citado 07 Enero 2006], p.461-467.

Xianwen Lou, Joost L. J. van Dongen *. 2000. Direct sample fraction deposition using electrospray in narrow-bore size-exclusion chromatography/matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for polymer characterization. Journal of Mass Spectrometry, Volume 35, Issue 11 , Pages 1308 - 1312.

Martin G. Schmid *, Nina Grobuschek, Claudia Tuscher, Gerald Gbitz, kos Vgvri, Egidijus Machtejevas, Andrius Maruka, Stellan Hjertn. 2000. Chiral separation of amino acids by ligand-exchange capillary electrochromatography using continuous beds. Electrophoresis, Volume 21, Issue 15 , Pages 3141 - 3144.

Peric, Ivan M., Rivas, Bernabe L., Pooley, Amalia et al. 1999. Separation of copolymers of variable compositions by capillary zone electrophoresis. Bol. Soc. Chil. Qum.. [online]. set. 1999, vol.44, no.3 [citado 07 Enero 2006], p.345-350.

Jetse C. Reijenga *, Theo P.E.M. Verheggen, Marcella Chiarib. 1999. Use of cyclofructan as a potential complexing agent in capillary electrophoresis. Journal of Chromatography A, 838 (1999) 111119